Working draft genome sequence of the mesophilic acetate oxidizing bacterium Syntrophaceticus schinkii strain Sp3

Sammanfattning

Syntrophaceticus schinkii strain Sp3 is a mesophilic syntrophic acetate oxidizing bacterium, belonging to the Clostridia class within the phylum Firmicutes, originally isolated from a mesophilic methanogenic digester. It has been shown to oxidize acetate in co-cultivation with hydrogenotrophic methanogens forming methane. The draft genome shows a total size of 3,196,921 bp, encoding 3,688 open reading frames, which includes 3,445 predicted protein-encoding genes and 55 RNA genes. Here, we are presenting assembly and annotation features as well as basic genomic properties of the type strain Sp3.

Nyckelord

Syntrophic acetate oxidizing bacteria; Acetogens; Syntrophy; Methanogens; Hydrogen producer; Methane production

Publicerad i

Standards in Genomic Sciences
2015, volym: 10, artikelnummer: 99
Utgivare: BIOMED CENTRAL LTD

SLU författare

• Manzoor, Shahid

  • Institutionen för husdjurens biovetenskaper, Sveriges lantbruksuniversitet
    
  • University of the Punjab

• Müller, Bettina

  • Institutionen för molekylära vetenskaper, Sveriges lantbruksuniversitet
    

• Niazi, Adnan

  • Institutionen för husdjurens biovetenskaper, Sveriges lantbruksuniversitet
    

• Schnürer, Anna

  • Institutionen för molekylära vetenskaper, Sveriges lantbruksuniversitet
    

• Bongcam Rudloff, Erik

  • Institutionen för husdjurens biovetenskaper, Sveriges lantbruksuniversitet
    

UKÄ forskningsämne

Genetik och förädling
Mikrobiologi

Publikationens identifierare

• DOI: https://doi.org/10.1186/s40793-015-0092-z

Permanent länk till denna sida (URI)

https://res.slu.se/id/publ/72289